Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928793.1_cds_XP_016476290.1_68137
CDS Infomation

[gene=LOC107797884] [db_xref=GeneID:107797884] [protein=phospholipid-transporting ATPase 1] [protein_id=XP_016476290.1] [location=join(27014..27948,28264..28309,28366..29100,29230..29353,29440..29659,30052..30510,30654..30873)] [gbkey=CDS]
Sequence

ATGGAGAATTCAACAGTTGCTGATTCCATTATGATGAATTCATCCTCTTTGAGGAGTGTT
TCATCTAATAGGTCAAGGGCCTCTGTTGGGGGCTCTGTCCGGGAGGTAAATTTTGGTGAT
TTAGTATCAAAAGCCGTGAGATATGGGTCGCGAGGTGCTGACTCCGAGGGGTATGGGACG
TCTCAAAAAGAGATTAGTGATGAGGATTCTAGAGTTATTTATTTAAATGATCCTGAAAAG
ACCAACGACAAGTTTGAATTTTCGGGGAATTCTATTAGGACTGCGAAATACTCTATTCTA
ACATTCTTGCCTCGGAACCTGTTTGAGCAGTTCCATAGAGTTGCATATATCTACTTTCTG
GTGATTGCTATTCTTAATCAGCTTCCTATGTTGGCTGTCTTTGGTCGAGGAGCTTCGATT
CTTCCATTGGCTTTTGTGCTATTAGTTACAGCAGTTAAGGATGCCTACGAGGATTATAGG
CGCCACCGCTCTGACAGGATTGAGAATAACCGGTTGGCATTGGTGTTGATGGATGGTCAG
TTTCAAGAGAAAAAATGGAAAGGCATAAGAGTGGGTGAAATCATCAAAATTTCATCAAGT
GGTACCATTCCTTGTGATATGGTATTGCTCTCGACAAGTGACACCACCGGGGTCGCCTAT
ATCCAGACTATAAATTTAGACGGTGAATCAAATCTGAAGACGCGGTATGCAAAGCAGGAG
ACGCAAATGAAGATGCCGGAAAAGGAGAGAATTAGTGGGGTGATCAAATGTGAGAAACCA
AATAGGAACATTTACGGTTTTCATGCTAATATGGAAATAGACGGGAAGCGTGTTTCTCTT
GGACCTTCAAATATAATCCTCCGTGGCTGTGAGCTCAAGAACACTAGTTGGGCTATTGGA
GTTGCAGTTTATGCTGGAAGGGAAACTAAAGCTATATGGAAATTTGAACTTTTAGATATT
GGAAAGAAGTCTCTAGCACGATTACCTACGACACAGTCTAACCCCCCCTTTCATGGTTGC
AGGTTCAATGTACTGGGCTTACATGAATTTGACAGTGACCGGAAGAGGATGTCAGTAATA
TTAGGTTGCCCCGACAACACAGTTAAAGTGTTTGTAAAAGGTGCTGATACATCCATGTTT
GGTGTCATTGATAAATCATTAAACTTGAATGTAGTACGAGCAACAGAATCGCATCTACAC
TCTTATTCTTCAATGGGTCTCAGAACCCTTGTAATTGGAATGAGAGAAATGAGTGCTTCT
GAATTCGAGGAATGGCAGTCTTCTTACGAGGCAGCAAACACTGCTGTGATTGGTAGGGCA
GCTTTACTTCGGAAAATAGCTGGCAACGTGGAAAAGAACCTCACCATCTTAGGTGCCTCT
GGTATTGAAGATAAATTGCAGAAAGGTGTTCCAGAAGCAATTGAGTCCTTAAGAGTGGCA
GGCATTAAAGTTTGGGTTTTGACTGGGGACAAGCAAGAAACTGCAATATCAATTGGCTAT
TCCTCAAAACTTTTAACGAGCAATATGACTCAGATTGTGATTAATAACAAATCTAAGGAG
CCATGTAAAAGGTCTTTGGAAGCTGCCCTGACTAGGTGTGCGACTCTGATGTCACATAAT
GCGGAGGAAAATACTGAAGCTGGAGCAAGTCCAATTGGTTTAATCATTGATGGGACAAGC
CTTGTTTATGTCCTTGACAGCGAACTTGAAGAACTGCTATTCCAGTTGGCCAGTTATTGT
TCTGTTGTACTCTGTTGTCGGGTGGCCCCATTACAGAAGGCTGGAATTGTTGCTCTCATA
AAGAACCGCACAAATGACATGACGCTCGCAATTGGGGATGGTGCAAATGATGTGTCAATG
ATCCAAATGGCTGATGTAGGCATTGGTATAAGTGGCCAAGAGGGACGTCAAGCTGTGATG
GCATCAGATTTTGCAATGGGCCAGTTCAGATTCTTGGTCCCTCTTCTGTTGGTTCATGGA
CATTGGAATTATCAACGAATGGGCTACATGATATTATACAACTTCTACAGAAATGCTATC
TTTGTTTTTGTCTTATTCTGGTATGCACTTTTTACAGCTTTCACTTTGACCACTGCCATA
ACTGACTGGAGCAGCATGTTATTCTCCATAATCTATACTGCGGTGCCTACAATAGTTGTT
GGGATTCTTGATAAGGATCTAAGTAGAGTAACTCTTATGAAGTATCCGCAACTCTACGGT
GCTGGACAAAGGCAAGAGAGCTATAATAAGAAATTATTTTGGGTAACCATGATTGACACC
TTATGGCAGAGTGTAGTGGCCTTCTTTGTACCTCTTCTAGCATACTGGGAAAGTGATGTT
GATATCTCAAGCATTGGTGACCTATGGACACTTGCTGTTGTTATTTTGGTCAATATACAT
TTAGCAATGGATGTGATCCGTTGGTCTTGGATTACTCATGCTGCAATTTGGGGTTCTATA
ATAGCCACTTTCATTTGTGTCATGGTCATCGACACTCTGACATTTCTACCTGGATACTGG
GCCATTTTCCATGCAGCTGGGGAAGCTAAATTCTGGTTGTGCTTGCTTGCCATAACAGTA
GCTGCACTTACTCCTCGTTTTGTCGTCAAAGCTTTCATTCAGCATGCTAGACCACGTGAT
ATTCAAATTGCAAGGGAAGGAGAGAAGTTCAGAAACTTAGGAGACTCTCGGACTGGAGAA
ATAGAAATGAATCCAATTGTTGATCCTCCGCGAAGATGA

Peptide Sequence

PEP ID

XP_016476290.1
PEP Infomation

PREDICTED: phospholipid-transporting ATPase 1 [Nicotiana tabacum]
Sequence

MENSTVADSIMMNSSSLRSVSSNRSRASVGGSVREVNFGDLVSKAVRYGSRGADSEGYGT
SQKEISDEDSRVIYLNDPEKTNDKFEFSGNSIRTAKYSILTFLPRNLFEQFHRVAYIYFL
VIAILNQLPMLAVFGRGASILPLAFVLLVTAVKDAYEDYRRHRSDRIENNRLALVLMDGQ
FQEKKWKGIRVGEIIKISSSGTIPCDMVLLSTSDTTGVAYIQTINLDGESNLKTRYAKQE
TQMKMPEKERISGVIKCEKPNRNIYGFHANMEIDGKRVSLGPSNIILRGCELKNTSWAIG
VAVYAGRETKAIWKFELLDIGKKSLARLPTTQSNPPFHGCRFNVLGLHEFDSDRKRMSVI
LGCPDNTVKVFVKGADTSMFGVIDKSLNLNVVRATESHLHSYSSMGLRTLVIGMREMSAS
EFEEWQSSYEAANTAVIGRAALLRKIAGNVEKNLTILGASGIEDKLQKGVPEAIESLRVA
GIKVWVLTGDKQETAISIGYSSKLLTSNMTQIVINNKSKEPCKRSLEAALTRCATLMSHN
AEENTEAGASPIGLIIDGTSLVYVLDSELEELLFQLASYCSVVLCCRVAPLQKAGIVALI
KNRTNDMTLAIGDGANDVSMIQMADVGIGISGQEGRQAVMASDFAMGQFRFLVPLLLVHG
HWNYQRMGYMILYNFYRNAIFVFVLFWYALFTAFTLTTAITDWSSMLFSIIYTAVPTIVV
GILDKDLSRVTLMKYPQLYGAGQRQESYNKKLFWVTMIDTLWQSVVAFFVPLLAYWESDV
DISSIGDLWTLAVVILVNIHLAMDVIRWSWITHAAIWGSIIATFICVMVIDTLTFLPGYW
AIFHAAGEAKFWLCLLAITVAALTPRFVVKAFIQHARPRDIQIAREGEKFRNLGDSRTGE
IEMNPIVDPPRR

Transcript Sequence

Gene sequence data has not been registered.